Rough run after security glitch

This can’t be a common event.
Yesterday while accidentally laundering my keys with the security fob, the truck went into alarm mode. I used the door key to open drivers side and punch the unlock button. All seemed fine. I dried the fob and it works fine. This morning I used the key to unlock again. As soon as I started it the check engine light came on. I drove about 15 miles and the truck ran so roughly under any load that the whole thing shook.
I parked and went to breakfast for an hour or so. This time I unlocked using the fob and the error was cleared and ran smoothly.
Could there be some secret connection between the security system and the computer?

 

Welcome from NY.

You may want to post your question here.....

https://www.tundras.com/forums/2nd-gen-tundras-2007-2013.26/

 

Welcome from LA (Lower Alabama)!